Inhomogeneous Poisson spike train generation
def gen_spikes(r,dt,rng): '''Generate spike train from Poisson rate Parameters ---------- r: Array of spike rates dt: Time step rng: Random number generator ''' i = 0 s = 0 spks = [] while True: s += rng.exponential() while s>r[i]*dt: s -= r[i]*dt i += 1 if i>=len(r): break else: spks.append(i*dt+s/r[i]) continue break return np.array(spks)